BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037F09LP1|AL430421
(928 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1741 1831 0.0
>3x_Contig1741
Length = 21706
Score = 1831 bits (923), Expect = 0.0
Identities = 926/928 (99%)
Strand = Plus / Minus
Query: 1 gatcttcttatccgattattacttttcttcctttccctatcaaagcacaaggccccaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2265 gatcttcttatccgattattacttttcttcctttccctatcaaagcacaaggccccaaaa 2206
Query: 61 accaaaaaaaaatctataaacactactcactaactctctccaagatgactagttcacata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2205 accaaaaaaaaatctataaacactactcactaactctctccaagatgactagttcacata 2146
Query: 121 catgaatcatacggtatatttccccgtaccgtgctgtgtatcaatttctaactattttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2145 catgaatcatacggtatatttccccgtaccgtgctgtgtatcaatttctaactattttct 2086
Query: 181 ctgtatcataaagaaaactaccggtgtatagacaatctcaaaattactataaaactgaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2085 ctgtatcataaagaaaactaccggtgtatagacaatctcaaaattactataaaactgaat 2026
Query: 241 ttctcgaaaaccagcatttgctattttttcagttgttccttttcaaaattttcgcttttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2025 ttctcgaaaaccagcatttgctattttttcagttgttccttttcaaaattttcgcttttt 1966
Query: 301 ccaagttcatcagaatttcgcgagttccttaatttaaactatgaacacgaaaaagctggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1965 ccaagttcatcagaatttcgcgagttccttaatttaaactatgaacacgaaaaagctggc 1906
Query: 361 agaaatttacttcattgcagggttttctatggatcgcaaagagtgaggttttctaaaacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1905 agaaatttacttcattgcagggttttctatggatcgcaaagagtgaggttttctaaaacc 1846
Query: 421 agctattagaggttcaaagtgaaacatgaaacaacggatcgctgagaacttgggaaatgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1845 agctattagaggttcaaagtgaaacatgaaacaacggatcgctgagaacttgggaaatgg 1786
Query: 481 cgagcgatccgatcatggggcgatgcgttaatatgcgagcgatacttctataattatatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1785 cgagcgatccgatcatggggcgatgcgttaatatgcgagcgatacttctataattatatg 1726
Query: 541 cgagcacatccatgtgtatatatatatatatacaacgagtgcgtnttgaacttgtttcag 600
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1725 cgagcacatccatgtgtatatatatatatatacaacgagtgcgtattgaacttgtttcag 1666
Query: 601 tattgttttagtaggaactgtctgtatcaagcgatgggcaccagagaccatctcgagtag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1665 tattgttttagtaggaactgtctgtatcaagcgatgggcaccagagaccatctcgagtag 1606
Query: 661 aagttgcacgcataaagtgataggaaatatgtcagaacaccaggcacttctgcagttcaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1605 aagttgcacgcataaagtgataggaaatatgtcagaacaccaggcacttctgcagttcaa 1546
Query: 721 taaacaggtggtaaatctggagatggttcattttttggccgctacaacagcgtcagtkat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1545 taaacaggtggtaaatctggagatggttcattttttggccgctacaacagcgtcagtgat 1486
Query: 781 cagcatcaatgacaccgacgttcgccatggatctacggtgagcctggtagatttcattaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1485 cagcatcaatgacaccgacgttcgccatggatctacggtgagcctggtagatttcattaa 1426
Query: 841 atcgttgatcaggcactctaacgtgcaaactccgacactgatggctactacagtctattt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1425 atcgttgatcaggcactctaacgtgcaaactccgacactgatggctactacagtctattt 1366
Query: 901 gactaaactgagatctattctacctcac 928
||||||||||||||||||||||||||||
Sbjct: 1365 gactaaactgagatctattctacctcac 1338
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,124
Number of Sequences: 1807
Number of extensions: 11124
Number of successful extensions: 1272
Number of sequences better than 1.0e-20: 1
length of query: 928
length of database: 10,358,551
effective HSP length: 16
effective length of query: 912
effective length of database: 10,329,639
effective search space: 9420630768
effective search space used: 9420630768
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)